Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYLDHAATTPMHPAAIEAMA-AVQRTIGNASSLHTSGRSARRRIEEARELIADKLGARPSEVIFTAGGTESDNLAVKGIYWARRDAEPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTWLP-TAADGSVSATALREALQSHDDVALVSVMWANNEVGTILPIAEMS--VVAME-----FGVP---MHSDAIQAVGQLPLDFGASGLSAMSVAGHKFGGPPGVGALLLR---RDVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRLLRDRLVEGVLAEIDDVCLNGADDP--MRLAGNAHFTFRGCEGDALLMLLDANGIECSTGSACTAGVA-QPSHVLIAMGVDAASARGSLRLSLGHTSVEADVDAALEVLPGAVARARRAALAAAGASR |
| 3A9Z Chain:B ((21-425)) | --YMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQ--TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRP--TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYG-PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAV--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181617 for 3281 contacts (-55.4/contact) +
2D Compatibility (PS) -41607 + (NN) -25367 + (LL) 1672
1D Compatibility (HY) -24000 + (ID) 6500
Total energy: -277419.0 ( -84.55 by residue)
QMean score : 0.458
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