Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNVVVGEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFE--QVSP-DLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKR--KVERIVLGRNELVS-DGSGRVA-AKDTGEREELPAQLVVRSVGYRGVPTP-----GLPFDDQSGTIPNVG-GRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGNAKEGAECKSFPEDHADQVADWLAARQPKLVTSAHWQVIDAFERAAGEPHGRPRVKLASLAELLRIGLG |
| 4YLF Chain:B ((139-463)) | -KKEKVAVVGSGPAGLTAAADLAKM-------GYHVDIFEAFHKPGGVLVYGI-PEFRLPKRIVEREVSYIRKLGVNFHLNTVVGKTVKVKELLSEYDAVFIGTGAGTPKFMGIPGTNLNGVYSANEFLTRVNLMKAYLFPEYDTPIRVGKKVAVIGAGNTAMDAARSALR--------------------LGAEKVYIVYRRTEREMPARR------------------E----------------------EYHHA-------LEEGIEFLWLTLPIRYIGDANGNVEAMECVRMELKEADGSGRPRPVPIEGSNFVLEVDMVIEAIGQGPNRVLLSEFPGLELNERGYIKADEDTGATS-VKGVFAGGDIVTGAATVI-KAMGAGKKAAQFIHSYLTGEW------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160198 for 2662 contacts (-60.2/contact) +
2D Compatibility (PS) -32937 + (NN) -13208 + (LL) 8992
1D Compatibility (HY) -11200 + (ID) 4400
Total energy: -212951.0 ( -80.00 by residue)
QMean score : 0.492
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