Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEQEMTEQWLEGCAVQRIMFRDGLV---LNFDDYNELVISV-----PLQLTLPAIETSPAEVVA----IDPNDPADHERPL----FDFAGATCTAFVWYDTGDLHLEFSDGHQID-VHPDDRVTAWELYGKYHGYAACLAPGKLRVVRHDVADANGDQ
2OST Chain:A ((1-148))
MGSTKLKGDIAQQAAIMRALKMGWGVLKPLGDRLSYDLVFDVEGILLKVQVKSSWKSEKTGNYVVDNRRTRTNRRNIVRSPYRGNDFDFAVAYVEELELFYVFPVDVFISYGSEIHLVETDKRQRKPRSFGYREAWHLILQKG-----------AAQKE
General information:
TITO was launched using:
RESULT:
Template:
2OST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38425 for 818 contacts (-47.0/contact) +
2D Compatibility (PS) -13685 + (NN) -516 + (LL) 1052
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -59324.0 ( -72.52 by residue)
QMean score : 0.028
(partial model without unconserved sides chains):
PDB file :
Tito_2OST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OST-query.scw
PDB file :
Tito_Scwrl_2OST.pdb
: