Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDLITVKKLGSRIGAQIDGVRLGGDLDPAAVNEIRAALLAHKVVFFRGQHQLDDAEQLAFAGLLGTP-IGHPAAIALADDAPIITPINSEFGKANRWHTDVTFAANYPAASVLRAVSLPSYGGSTLWANTAAAYAELPEPLKCLTENLWALHTNRYDYVTTKPLTAAQRAFRQVFEKPDFRTEHPVVRVHPETGERTLLAGDFVRSFVGLDSHESRVLFEVLQRRITMPENTIRWNWAPGDVAIWDNRATQHRAIDDYDDQHRLMHRVTLMGDVPVDVYGQASRVISGAPMEIAG |
4J5I Chain:C ((8-288)) | ----VTVTKLGAHIGARIDGVRVGGDLSPATVSAINAALLEHKVIFFSGQDHLDDAGQLEFAELLGTPTVAHPT---LAEGAEQLLPIDSRYDKANSWHTDVTFVDRIPKASLLRAVTLPSYGGTTAWASTEAAYQQLPAPLRTLADNLWAVHTNR----------------------DYYEVEHPVVRVHPETGERVLLLGHFVKSFVGLKDTESAALFRLFQDRITRLENTVRWSWKPGDLAIWDNRATQHYAVADYDDQYRRLNRVTLAGDIPVDVYGERSRVIAG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117801 for 2141 contacts (-55.0/contact) +
2D Compatibility (PS) -28196 + (NN) -16724 + (LL) 3396
1D Compatibility (HY) -27600 + (ID) 8550
Total energy: -195475.0 ( -91.30 by residue)
QMean score : 0.548
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