Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MIQVCSQCGTGWNVRERQRVWCPRCRGMLLAPLADMPAEARWRTPARPQVPTASDTRRTP--------------PRLPPGFRWIAVRPGAAPPPRHGPRLRGP-TPRYAGIPRWGLTDHVDQAPVPASAKAGPSPAAVRTTLLVSLLVFS------IAVVVFVVRYVLLVINRNTLLNSVVASASVWLGVLVSLAAIAAAGTTIVL--LVRWLVARRAAAFMHQGLPERRSARELWAGCLLPMVNLLWAPLYVIELALVEDRYTRLRRPIVVW-----WIVWIVSNAISMFAFA------------TSWVTDAQGIANNTTMMVLAYLCAAAAVAAAARVFEGFEQKPVERPAHRWVVVNTDGRSAPASSVAVELDGQEPAA |
| 3J4Q Chain:B ((9-394)) | GLTELLQGYTVEVLRQQPPDLVDFAVEYFTRLREARRQESDTFIVSPTTFHTQESSAVPVIEEDGESDSDSEDADLEVPVPSKFTRRVSVCAETFNPDEEEEDVVHPKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFEKIVKTDEHVIDQGDDGDNFYVIERGTYDILVTKDNQTRSVGQYDNRGSFGELALMYNTPRAATIIATSEGSLWGLDRVTFRRIIVKNNAKKRKMFESFIESVPLFKSLEMSERMKIVDVIGEKIYKDGERIIAQGEKADSFYIIESGEVSILIRSKTKSNKNGGNQEVEIAHCHKGQYFGELALVTNKPRAASAYAVGDVKCLVMDVQAFERLLGP-CMDIMKRNISHYEEQLVKMFGSN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182258 for 2088 contacts (-87.3/contact) +
2D Compatibility (PS) -35023 + (NN) 5335 + (LL) 304
1D Compatibility (HY) 3200 + (ID) 2100
Total energy: -210542.0 ( -100.83 by residue)
QMean score : 0.166
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