Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEMKTDAATLAQEAGNFERISGDLKTQIDQVESTAGSLQGQWRGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYSRADEEQQQALSSQMGF
4LWS Chain:A ((35-131))
--QSAVDRAAMAQAAQDIEQSANAIRGMQNQLASAKDQLRSHWEGDASMAFEAVFNRFNEDFSRVLKALDGMHESLVQTRITYEAREEAAQQSVNRVQA-
General information:
TITO was launched using:
RESULT:
Template:
4LWS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5697 for 492 contacts (11.6/contact) +
2D Compatibility (PS) -10626 + (NN) -2613 + (LL) 484
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -11858.0 ( -24.10 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_4LWS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LWS-query.scw
PDB file :
Tito_Scwrl_4LWS.pdb
: