Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKFKGALVVGALRLFALLPWRAVQGVGAGIGWLMWKLPNRSREVVRINLSKCFPELSETELEKLVGQSLMDIGRTLTESACAWIWPPEKSLRYIREVEGMEVLEEALASGDGLVGITSHLGNWEVLNHFYCSYAKPIIFYRPPKLKAVDELLKKQRVQLGNRVAPSTPEGILSVIKEVKKGGCVGIPADPEPARTAGLFVPYLGTTALISKFVPQ--LLSRGKARGVFFHAVRLPDGSGYKVILEAAPADMYDKDLEVSVAAMSRELAKYVRAYPSQYMWSMKRFKNRPDGEKKWY-
1YAR Chain:O ((10-237))----------------------------------------KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGVIRNSTYGR----------AQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKE------------EDNLGVAVQHAVLKIIDELEIK-TLGSGEKSGSG----------GAPTPIGMYALREYLSARSTVEDKLL-------GGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGSDHMVS


General information:
TITO was launched using:
RESULT:

Template: 1YAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34868 for 1488 contacts (-23.4/contact) +
2D Compatibility (PS) -22240 + (NN) -3086 + (LL) 6936
1D Compatibility (HY) -5600 + (ID) 1700
Total energy: -60558.0 ( -40.70 by residue)
QMean score : 0.277

(partial model without unconserved sides chains):
PDB file : Tito_1YAR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YAR-query.scw
PDB file : Tito_Scwrl_1YAR.pdb: