Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKFKGALVVGALRLFALLPWRAVQGVGAGIGWLMWKLPNRSREVVRINLSKCFPELSETELEKLVGQSLMDIGRTLTESACAWIWPPEKSLRYIREVEGMEVLEEALASGDGLVGITSHLGNWEVLNHFYCSYAKPIIFYRPPKLKAVDELLKKQRVQLGNRVAPSTPEGILSVIKEVKKGGCVGIPADPEPARTAGLFVPYLGTTALISKFVPQ--LLSRGKARGVFFHAVRLPDGSGYKVILEAAPADMYDKDLEVSVAAMSRELAKYVRAYPSQYMWSMKRFKNRPDGEKKWY- |
1YAR Chain:O ((10-237)) | ----------------------------------------KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGVIRNSTYGR----------AQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKE------------EDNLGVAVQHAVLKIIDELEIK-TLGSGEKSGSG----------GAPTPIGMYALREYLSARSTVEDKLL-------GGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGSDHMVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34868 for 1488 contacts (-23.4/contact) +
2D Compatibility (PS) -22240 + (NN) -3086 + (LL) 6936
1D Compatibility (HY) -5600 + (ID) 1700
Total energy: -60558.0 ( -40.70 by residue)
QMean score : 0.277
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