Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTFARLAAGLCICAIASQANAWSQPTHKNIVKDALAFMNSSYATEEMRQAYRFYVSAAGSEAQAGEILGQ-----AAFDVDDFKDTRLGGWWVGYEHAPLWGAASGIVNYTSYWHFLNLARDGDS-HGNPHGGYDYRYHKVDGGIADVDWYAMVYLYNRELKREDFDTTEAHYRQGTRSDWQEHYGDFQTAAFQPIDNLATYWFEQFRAAPSLQTIGYALHATGDVAQPHHVWITSANGHSSWEGWVDDHYASEKLNDPAAVANLVGRYDPSKSIRDLLTQTG-------QVAYARPEPLYDTSYETRLRVAKELIPESIALTVTVLTKGANSFDAPTAL--------- |
4B46 Chain:A ((1-367)) | MK-LAMIGFGQAGGKVVDKFVEYDRERNAGIVRAAVAVNSAKADLLGLKNIPKDQRVLIGQSRVKGHGVGADNELGAEIAEEDIDEVQGAIDSIPVHEVDAFLVVSGLGGGTGSGGAPVLAKHLKRIYTEPVYGLGILPGSDEGGIYTLNAARSFQTFVREV-----DNLLVFDNDAWRKTGESVQGGYDEINEEIVNRFGVLFGSVVDSSEIINTL-----AGGG---------VSTVGYASEGVTAHTTNRITSLVRKAALGRLTLPCEIEGAERALLVLAGPPEHLNRKGIERGRKWIEEQTGSMEVRGGDYPIPGAEKVAGVILLSGVTNVPRIKELQQVAIEAQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B46.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60989 for 2809 contacts (-21.7/contact) +
2D Compatibility (PS) -31304 + (NN) 1596 + (LL) 1616
1D Compatibility (HY) 400 + (ID) 2400
Total energy: -91081.0 ( -32.42 by residue)
QMean score : 0.186
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