Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHRLLSDRARGWRRALCGIVLGLLAWSAHGVPAKAPQDLRIDGEVLPGRSIDLLEQALSRVKFNTDPQQLRRGLVENRLLARAVEDQLTAQSRADLDASVEIEAGNLLEQVYGRRYREDLGPYLRQPRALSAERLREVLAPRSRGLVENSLLLDETQRREAAGVELIGWQFPGQPAQVLDLLSLYEGDNVQGQVELQQGNLAYLARQVQTRIRRDYLWYRLARDGFGPAERQGVRTLVRDKLVRHRYLHQIGLYSDFHHESDALRELAGKVSDKDAEAYYRRNLERYRNVAQVQAAHIRLADQASADKVYAELRGGLAFDEAVRRYSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQKADTVSQPMRIDGAFEIVRVRSREDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVEGL |
1JNS Chain:A ((2-91)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTAAALHILVKEEKLALDLLEQIKNGADFGKLAKKHSICP--SGKRGGDLGEFRQGQMVPAF-DKVVFSCPVLEPTGPLHTQFGYHIIKVLYRN-------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1JNS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -11782 for 646 contacts (-18.2/contact) +
2D Compatibility (PS) -10130 + (NN) -10326 + (LL) 25396
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -10492.0 ( -16.24 by residue)
QMean score : 0.421
|
|
|