Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFAQNLLRLRQQNALTQRQMAERLGITVSQLRHFETK-GGHPSLVVLQTIAGRFAVPLDWLVCERSERQALPEDL---R--LQFEAIGRLRLDERRAIRALLDDLIRQYMAKRNAAAKPLPAACAEATETSP
1B0N Chain:A ((1-108))
-MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHET-----LDSEWEKLVRDAMTSGVSKKQFREFLDYQKWRKSQ------------------------
General information:
TITO was launched using:
RESULT:
Template:
1B0N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40656 for 571 contacts (-71.2/contact) +
2D Compatibility (PS) -10911 + (NN) -7903 + (LL) 2308
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -61212.0 ( -107.20 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_1B0N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B0N-query.scw
PDB file :
Tito_Scwrl_1B0N.pdb
: