Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MRPLTRLVPLALLLLAGCAGPLPQPDPQMAWVELRSAPANTLLAERLDGERLSDGRYFQVTPGRHVLEVRFQYELYGGSGGGG--GGFGEPVQINCYQQVVYDGFEAGRRYRL------EVRPQLRRALALLSDERGEVVARSNFQTSRCPPY
4B9G Chain:A ((16-161))
DIDSAVRIIPVNY-------DSDPKLNSQLYTVEMTIPAGVSAVKIVPTDSLTSSGQQIGKLVNVNNPDQNMNYYIRKDSGAGKFMAGQKGSFSVKENTSYTFSAIYTGGEYPNSGYSSGTYAGHLTVSFYSNDNKQRTEIATKNFPVSTTIS-
General information:
TITO was launched using:
RESULT:
Template:
4B9G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17734 for 1000 contacts (-17.7/contact) +
2D Compatibility (PS) -14864 + (NN) -6776 + (LL) 792
1D Compatibility (HY) -1200 + (ID) 1000
Total energy: -40782.0 ( -40.78 by residue)
QMean score : 0.151
(partial model without unconserved sides chains):
PDB file :
Tito_4B9G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B9G-query.scw
PDB file :
Tito_Scwrl_4B9G.pdb
: