Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLRLTITSYHKLTPGQCSEKVLDQ-----GQLTIGRGPDNDWVLPDPERLVSSRHCTILNRD--GVYYLTDTST-NGVLLVNAGHRLRR--------GNSEPLQDGETVRLGEYDILVQLGHDIALPGSGNPQTDPFTSFDALMSRQAAGSAPAFAEPAPTPHPAVTAHFQGGSPLDTKPDLFDFLTPPPPGAAPRPDHVPAEQHDFRPPEPVIPPPPATTPAPPPAGGAPLIPADWDPFAELLGNTPAPSATPVAQPLPTAEPTPLAMPFADPGITQQPQPQPQPQPQPQPQPQPQPQPASVAAPTPPASAAASAGGDLLQAFLRGAGMTQLKVDPAGAEAQMEAIGRSYRGLVEGLVDVLRARASLKGEFRMAQTMIQPVQNNPLKFAPNVDEAMLLLLRRDNQAFMAPDRAVADSFEDLKAHQLAVMAGVQAAIRHLLARFEPAALEARFGKPAGLSGLLPGARQAQNWDSFTELYAKILREAEDDFQELFGREFSRAYEEHSARLRRS |
| 1MZK Chain:A ((181-297)) | -WLFLEVIAGPA----IGLQHAVNSTSSSKLPVKLGRVSPSDLALKD--SEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNS--HSISHPDLGSRKWGNPVELASDDIITLGTTTKVYVRISSQN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MZK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39136 for 809 contacts (-48.4/contact) +
2D Compatibility (PS) -10994 + (NN) -4827 + (LL) 18296
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -39761.0 ( -49.15 by residue)
QMean score : 0.470
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