Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MNPRLLEYYNQELQHIRESAAEFA----EEFPKIAGRLSLSGFECADPYVERLLEGFAYLTARVQLKLDAEYPTFTHNLLEIAYPHYLAPTPSMTVVQLRPDPNEGALSSGFSIERGASLRGQLGPDDQTACEYRTAHPVTLWPLEVAQADYFGNPAAVLGRLAASEPRAKAGLRIRLRSG-AGIPFDSLSLDALPLYLHGADEQPYRLYEQLLGNA-CAVFVRAPDNAWVERLPTSSLRARGFDDEDALLPVVPRAFQGYRLLQEYFALPARFLFVEFSGLNRALRRCHGEELELVVLFGKHDQRLEGTVDAEQLVPFCTPAINLFPRRCDRIHLSDRVNEHHVIVDRTRPLDFEVHSLQQVSGHGSGPEQPFQPFYAVRDPARYGREQAYFRVRREPRVLSSK-QRRKGPRSTYVGSETFVALVDANQAPYRHDLRQLGIAALCTNRDLPLFMPIGAHKSDFTLEDSAPVMQVRCLAGPSRPRASRAHDASAWRLISQLSLNYLSLAERGQGAAALRELLRLYGDSGDPALQ-LQIEGLREVSSKPCTRRLPMPGPIVFGR-GLEITLDFDENAFRGTGVFLLGAVFERFLARYVSINSFTETVLRTGERGEVMRWQAKPGSRPNL |
| 3K9D Chain:A ((3-456)) | LEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYIK----------DMKTIGMLKEDNEKK-------------VMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISC---------MTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSGTPAIGVGPGNG------------------------PAFIE--------RSANIPRAVKHILDSKTFDN--GTICA---------------------------SEQSVVVERVNKEAVIAEFRKQ---------------------------GAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANL---------------------------------AGLTVPADARVLIAEETKVGAKIPYSREKLAP--------ILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIG-------ATTNLVPALTLGCGAVGGSSSSDNIGPENLFNIRRIATGVLELEDIR--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K9D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64241 for 4045 contacts (-15.9/contact) +
2D Compatibility (PS) -47105 + (NN) -20099 + (LL) 10732
1D Compatibility (HY) 800 + (ID) 3550
Total energy: -123463.0 ( -30.52 by residue)
QMean score : 0.266
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