Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSLKGMAIFATVVDKGSMAAAAQSLGMTPSAVSQQIRKLESRAQVTLLHRTTRRLTLTEAGEAFYRSCAQMLAIAEEAERRLGEWRDAPVGELRLAAPVGFSGTLITQALKPLLENHRQLRLQLFFQDERIDLVAERIDLAIRVGNLADSSLVARHLGDWSSVLCAAPAYLRQRAPINRPEQLTEVDWISLNTSNHLN--HLTLSGPGGEVCKLRLEPRVAANGMLAVRQFTLDGLGVSYQPLPEVRDALNDGRLQQLLPEWRIPGLGIYAVTPRREAQPAKVKVAIEALRRAFATDGDERWS |
3MZ1 Chain:A ((85-296)) | ----------------------------------------------------------------------------------------LPKGRLRVETASAFANLVIIPALPEFHKKYPDIQIDLGVSDRT--YLAENVDCAIRAGTLTDQSLIARRITEMKFVACASRDFLERHPVPQHPSDLEKNCYVVGYFLPK-QQMPFHFRRG-NEEIEVSGRYTMAANESTTYLAAARAGLGVIQAPLFMVREDLRNGTMVPVLPDWQVEPMPIYLVYPPNRHLSSRLRVFADWVVKVMAQSQN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MZ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126650 for 1603 contacts (-79.0/contact) +
2D Compatibility (PS) -21973 + (NN) -10217 + (LL) 8456
1D Compatibility (HY) -14000 + (ID) 2600
Total energy: -166984.0 ( -104.17 by residue)
QMean score : 0.413
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