Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLPANLGRLLPALCLGVLLSACSTFGQRDPLRIDLVGLEPLPGQGMEMRFMVKLRVQNPNDEPIEYNGIALDLDVNGQPLASGVSDQTGEVPRFGERVVSVPLTVSAFSAFRQAWGLSNNAPTQGMPYVVKGKLA--GGLFGTVRFSEKGTLDFSGPAVGAPKTKGL
1XO8 Chain:A ((1-151))
MASLLDKAKDFVA----------DKLTAIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVD---WDIDYELQIGLTIDLPVVGEFTIPISSKGEIKLPTFKDFF----
General information:
TITO was launched using:
RESULT:
Template:
1XO8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23361 for 1088 contacts (-21.5/contact) +
2D Compatibility (PS) -16010 + (NN) -8269 + (LL) 1128
1D Compatibility (HY) -6400 + (ID) 950
Total energy: -53862.0 ( -49.51 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_1XO8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XO8-query.scw
PDB file :
Tito_Scwrl_1XO8.pdb
: