Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQQHDTHSKAIGYLLWIFGFTGSHRFYYGKPIT-GTIWFFTFGLFFIGWIIDLFLIP-SMDREADRRFQGGNLDYNVAWILLTFLGVLGVH-----------------RMYMGKWITGIIYLF----TGGLFFLGVL-------YDFWTLNGQVSERNGPQRI
1WIX Chain:A ((1-164))
GSSGSSGLPLCDSLIIWLQTFKTASPCQDVKQLTNGVTMAQVLHQIDVAWFSESWLSRIKDDVGDNWRIKASNLKKVLHGITSYYHEFLGQQISEELIPDLNQITECADPVELGRLLQLILGCAVNCEKKQEHIKNIMTLEESVQHVVMTAIQELMSKSGPSSG
General information:
TITO was launched using:
RESULT:
Template:
1WIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123613 for 950 contacts (-130.1/contact) +
2D Compatibility (PS) -13793 + (NN) -3340 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -144496.0 ( -152.10 by residue)
QMean score : 0.206
(partial model without unconserved sides chains):
PDB file :
Tito_1WIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WIX-query.scw
PDB file :
Tito_Scwrl_1WIX.pdb
: