Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTLAPESTRQNLRSQRLNLLTNEPHQRLES---LVKSKEPFASRDNFARFVAAQYLFQHDLEPLYRN---EALARLFPGLASRARDDAARADLADLGH-------PVPEGDQSVREADLSLAE-----ALGWLFVSEGSKLGAAFLFKKAAALEL---DENFGARHLAEPEGGRAQGWKSFV-AILDGIELNEEEERLAAKGASDAFNRFGDLLERTFA----
1N45 Chain:A ((10-223))
-----PQDLSEALKEA-----TKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEMTPAVRQRVIEEAKTAFLLNIQLFEELQELLTH
General information:
TITO was launched using:
RESULT:
Template:
1N45.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15431 for 1362 contacts (-11.3/contact) +
2D Compatibility (PS) -20726 + (NN) -11387 + (LL) 1052
1D Compatibility (HY) -5600 + (ID) 1750
Total energy: -53842.0 ( -39.53 by residue)
QMean score : 0.316
(partial model without unconserved sides chains):
PDB file :
Tito_1N45.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N45-query.scw
PDB file :
Tito_Scwrl_1N45.pdb
: