Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGPTDTSTQPQGFSMTRLRLIGSAVLLSLSSMAMADSASQAEQFLKLVHADKLTVPVYAQVQQMLAQRFAQAKAPESKKAVLERYQAKANAELDRAIGWDKIKPELIKLYTTNFTESELKDLNAFYQSPLGKKVLEKMPRLTAESAQLTQAKLQGAVEPVNKLMADMDKELGVAAPAQKKK |
1NML Chain:A ((280-311)) | --------------------------------------------------------------------------------------------------------------LGTELNNDEVKSIVAFLKTLTGNVPEVTYPVLPPSTANTPKPVDMIP------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1132 for 104 contacts (10.9/contact) +
2D Compatibility (PS) -3383 + (NN) -1560 + (LL) 11452
1D Compatibility (HY) -2000 + (ID) 400
Total energy: 5241.0 ( 50.39 by residue)
QMean score : 0.412
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