Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALVDGFLELERSSGKLEWSAILQKMASDLGFSKILFGLLPKDSQDYENAFIVGNYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPSIYQTRKQHEFFEEASAAGLVYGLTMPLHGARGELGALSLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAFEHPVSKPVVLTSREKEVLQWCAIGKTSWEISVICNCSEANVNFHMGNIRRKFGVTSRRVAAIMAVNLGLITL
3IX4 Chain:F ((3-168))
--LVDGFLELERSSGKLEWSAILQKMASDLGFSKILFGLLPKDSQDYENAFIVGNYPAAWREHYDRAGYARVDPTVSHCTQSVLPIFWEPSIYQTRKQHEFFEEASAAGLVYGLTMPLHGARGELGALSLSVEAENRAEANRFMESVLPTLWMLKDYALQSGAGLAFE-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IX4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107353 for 1284 contacts (-83.6/contact) +
2D Compatibility (PS) -17586 + (NN) -3493 + (LL) 6116
1D Compatibility (HY) -23600 + (ID) 8300
Total energy: -154216.0 ( -120.11 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_3IX4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IX4-query.scw
PDB file :
Tito_Scwrl_3IX4.pdb
: