Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVFSQVSMSHPINLCL----AELDRAAIGRLWAPVDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEAGGQRVSLWSEVEHEFR---
2N2H Chain:B ((1-125))
SNAEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEE-EWREAQRGFNKVWREQNEKYYLKS
General information:
TITO was launched using:
RESULT:
Template:
2N2H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44695 for 744 contacts (-60.1/contact) +
2D Compatibility (PS) -12114 + (NN) -1619 + (LL) 208
1D Compatibility (HY) -2000 + (ID) 1050
Total energy: -61270.0 ( -82.35 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_2N2H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2N2H-query.scw
PDB file :
Tito_Scwrl_2N2H.pdb
: