Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFLLIGLSEHRPLPLGQGSPLRWLALLFGLLAWHAGAGERVIYPRHSEGRNPEPYVVELLQLALAR-SGGDYRLEPSAQPMPQSRAQLRLEQDDPGLQVMWA-QS-RDDLEETLLPIRIPIYRGLIGWRIPLVSAANKDILASARTLDDLRRLRFGQRQDWADTPILRAN---GLEVKTSQNYESLFRMLDAGRFEVFPREVVVIDGELEDASRAGLHLAIDQHLALHYPAAFYFFVSRQRPELAEAIRQGLEKAIADGSFERLFERHFKTRLEKLALRQRRIIELKNPYLPGKTPFQREALWYRP |
| 2PVU Chain:A ((59-265)) | ------------------------------------------------QKGKIVGFDVDLLDAVMKAAGL---DYELK--NIGWDPLFASLQSK--EVDMGISGITITDERKQSYDFS-DPYFEATQ---VILVKQGS-----PVKNALDLKGKTIGVQNATTGQEAAEKLFGKGPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPN--KKLQVIEDPKNFASEYYGMIFPK-NSELKAKVDEALKNVINSGKYTEIYKKWFGKEPKLDRLKQ-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99315 for 1501 contacts (-66.2/contact) +
2D Compatibility (PS) -21544 + (NN) -3979 + (LL) 5896
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -124542.0 ( -82.97 by residue)
QMean score : 0.481
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