Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPFATIPATERNSAAQHQDPSPMSQPFDLPALASSLADKSPQDILKAAFEHFGDELWISFSGAEDV-VLVDMAWKLNRNVKVFSLDTGRLH--PETYRFIDQVREHYGIAIDVLSPDPRLLEPLVKEKGLFSFYRDGHGECCGIRKIEPLKRKLA--GVRAWATGQRRDQSPGTRSQVAVLEIDG-----A---FSTPEKPLYKFNPLSSMTSEEVWGYIRMLELPYNSLHERGYISIGCEPCTRPVLPNQHEREGRWWWEEATHKECGLHAGNLISKA |
| 3VRH Chain:A ((47-216)) | -----------------------------------------------------DERILVAVSGGKDSAVTAYVLKKLGYNIECLHINLGISGYSEKSEEYAKKQCKLIGAPLHIVRIKEI-LGYGIG--EVK--TRRPPCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEAS-FLLNNILHWNTEYLAKGGPILPQQGKFIKKVKPLYEVTEREVVAYALAVGLEYIVEECPYTTLDMKGVLNELEEKRPGTKFNFVRGYLKKKKLFEPKECKICRMP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VRH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59717 for 1139 contacts (-52.4/contact) +
2D Compatibility (PS) -16673 + (NN) -5766 + (LL) 3604
1D Compatibility (HY) -8400 + (ID) 1550
Total energy: -88502.0 ( -77.70 by residue)
QMean score : 0.353
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