Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREYQRLKGFTDNLELRRRNRATVEHYMRMKGA-ERLQRHSLFVEDGCAGNWTTESGEPLVFRGHESLRRLAEWLERCFPDWEWHNVRIFETEDPNHFWVECDGRGKALVPGYPQGY---CENHYIHSFELENGRIKRNREFMNPMQKLRALGIAVPQIKRDGIPT
3JUM Chain:A ((36-184))
------------QVAARQHNRKIVEQYMHTRGEARLKR-HLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDWVWTDIQIFETQDPNWFWVECRGEGAIVFPGY---PRGQYRNHFLHSFRFENGLIKEQREFMNPCEQFRSLGIEVPEVRRDGLPS
General information:
TITO was launched using:
RESULT:
Template:
3JUM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36211 for 958 contacts (-37.8/contact) +
2D Compatibility (PS) -15809 + (NN) -6432 + (LL) 808
1D Compatibility (HY) -13200 + (ID) 3800
Total energy: -74644.0 ( -77.92 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_3JUM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JUM-query.scw
PDB file :
Tito_Scwrl_3JUM.pdb
: