Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRCRNCGERPASE-----GHICMVCKRRSDIDPYKALIAMALLVYCGVSLAAYLKPHMPAPPPTAGSSVQPAEELAQRARQATLEQRGI
2F9I Chain:B ((31-67))
-TKCPKCKKIMYTKELAENLNVCFNCDHHIALTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYLEKIEKDQQKTGLKEAVVTGTAQLD
General information:
TITO was launched using:
RESULT:
Template:
2F9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2202 for 149 contacts (-14.8/contact) +
2D Compatibility (PS) -3244 + (NN) -1524 + (LL) 208
1D Compatibility (HY) -2800 + (ID) 300
Total energy: -9862.0 ( -66.19 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_2F9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F9I-query.scw
PDB file :
Tito_Scwrl_2F9I.pdb
: