Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPDTSPDLPAMSPLAVYRQAVEQRGFAPDEAQRRAAEALERCFQALHEAHRHGAIQGVYLWGPVGRGKTWLMDHFYQCLRVPARRQHFHHFMQWVHQRQFELTGTADPLRALARELARDVRVLCFDELFVSDIGDAILLGSLLRIMFEEGVVLVATSNQPPEQLYADGFNRERFLPAIEAIQRHMAVVAVDGGQDHRLHPGRAEQRYWVVEAGQASGFAELFARLSAGEAASTQPIELGHRPLAVHRHSESVLWCSYAQLCEAPLSALDFIGLCDRYRAILMDDLPCLSASQREGRIARGTEDGAQLVEAGDRELPQLSVHDDGVRRFIALVDECYDRKVPLYLEARVPLEALYTEGYLAFAFRRTLSRLREMQLARFGSDSAG |
| 1SV6 Chain:A ((1-261)) | -----------------------------MTKHTLEQLAADLRRAAEQGEAIAPLRDLI--GIDNAEAAYAIQHINVQHDVAQGRRVVGRKVGLTHPKVQQQLGVDQP-----------DFGTLFADMCYGD-NEIIPFSRVLQPRIEAEIALVLNRDLPATDI-----TFDELYNAIEWVLPALEVV------GSRIRDWSIQFVDTVADNASCGVYVI------GGPAQRPAGLDLKNCAMKMTRNNEEVSSGRGSECLGHPLNAAVWLARKMASLGEPL---------RTGDIILTGALGPMVAVNAGD----RFEAHIEGIGSVAATFSS-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SV6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125369 for 2275 contacts (-55.1/contact) +
2D Compatibility (PS) -27097 + (NN) -3469 + (LL) 8572
1D Compatibility (HY) -6400 + (ID) 2050
Total energy: -155813.0 ( -68.49 by residue)
QMean score : 0.216
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