Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEVKHSRLIILGSGPAGYTAAVYAARANLKPVVITG-----IQPGGQLTTTTEVDNWPGDVEGLTGPALMTRMQQHAERFDTEIVYDHIHTAELQQRPFTLKGDSGTYTC-DALIIATGASAQYLGMSSEEAFMGKGVSACATCDGFFYRNQVVCVVGGGNTAVEEALYLANIAKEVHLIHRRDKLRSEKILQDKLFDKAENGNVHLHWNTTLDEVLGDASGVTGVRLKSTIDGSTSELSLAGVFIAIGHKPNTDLFQGQLEMRD-GYLRIHGGSEGNATQTSIEGVFAAGDVADHVYRQAITSAGAGCMAALDAEKYLDDH |
| 4CCR Chain:D ((7-314)) | --------VVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAK---------------------------------------------------------------------------------------------------------------------------AIGHSPNSKFLGGQVKTADDGYILTEG------PKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQTH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CCR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110101 for 1530 contacts (-72.0/contact) +
2D Compatibility (PS) -19178 + (NN) -5739 + (LL) 8344
1D Compatibility (HY) -16400 + (ID) 4350
Total energy: -147424.0 ( -96.36 by residue)
QMean score : 0.515
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