Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKEIINVVHGTFTQLRSLVMIFGHAFRKRDTLQYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNL--CAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEFKRQDLVYEKHDLLISGPGKNPDYNYYRVAGMAIAGKPKGAAQNEAEPINVKSLLP
1F5B Chain:A ((6-54))
-----------------------------------------------------------DNCIKCKYTDCVEVCPVDCFY-------EG---PNFLVIHPDECIDCALCEPECPAQAI------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1F5B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37033 for 264 contacts (-140.3/contact) +
2D Compatibility (PS) -4703 + (NN) -1292 + (LL) 8424
1D Compatibility (HY) -6400 + (ID) 1050
Total energy: -42054.0 ( -159.30 by residue)
QMean score : 0.212
(partial model without unconserved sides chains):
PDB file :
Tito_1F5B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F5B-query.scw
PDB file :
Tito_Scwrl_1F5B.pdb
: