Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTYFDIPHRLVGKALYESYYDHFGQMDILSDGSLYLIYRRATEHVGG-SDG-R-VVFSKLEGGIWSAPTIVAQA----GGQDFRDVAGGTMP-SG--RIVAASTVYE-----------------TGEVKVYVSDDSGVTWVHKFTLARG-G--ADY---N-FAHGKSFQVG-ARYVIPLYAATGV----NYELKWLESSDGGETWGEGSTIYSGNTPYNETSYLPVGDGVILAVARVGSGAGGALRQFISLDDGGTWTDQGNV-TAQN----GDSTDILVAP-SLSYIYSEGGTPHVVLLYTNRT-----THFCYYRTILLAKAVAGSSGWTE----RVPVYSAPAASGYTSQVVLG---GRRILGNLFRETSSTTSGAYQFEVYLGGVPDFESDWFSVSSNSLYTLSHGLQRSPRRVVVEFARSSSPSTWNIVMPSYFNDGGHKGSGAQVEVGSLNIRLGTGAAVWGTGYFGGIDNSATTRFATGYYRVRAWI |
| 3SIL Chain:A ((30-361)) | ------------------TKYFRIPAMCTTSKGTIVVFADARHNTASDQSFIDTAAARSTDGGKTWNKKIAIYNDRVNSKLSRVMDPTCIVANIQGRETILV-MVGKWNNNDKTWGAYRDKAPDTDWDLVLYKSTDDGVTFSKVETNIHDIVTKNGTISAMLGGVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTD-GITWSLPSGYCE--GFGSENNIIEF-NASLVNNIRNSG----LRRSFETKDFGKTWTEFPPMDKKVDNRNHGVQGSTITIPSGN----------KLVAAHSSAQNKNNDYTRSDISLYAHNLY-SG-EVKLIDDFYPKVG--NASGAGYSCLSYRKNVDKETLYVVYEANG-------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SIL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103938 for 2293 contacts (-45.3/contact) +
2D Compatibility (PS) -30296 + (NN) -10856 + (LL) 5932
1D Compatibility (HY) 400 + (ID) 2150
Total energy: -140908.0 ( -61.45 by residue)
QMean score : 0.309
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