Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSALSIRQLTKTYGNGFQALKGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGSVSVFGHDLD----KDPAGLK-RCLGVVPQEFNFNQFE-KVFDIVVTQAGYYGIPAKIAKERAERYLTQLGLWDKRNEASRMLSGGMKRRLMIARALVHQPRLLILDEPTAGVDIELRRSMWSFLTELNQEGISIILTTHYLEEAEQLCRNIAIIDHGEIVQNTSMRDLLMTLHSETFLLDLKNVQALPPTLDGYPTRLVDDHTLEVQVEKSQGINDLFAQLGAQGIEVLSLRNKTNRLEELFVSLVEKNLTRIAR |
| 2PCL Chain:A ((16-218)) | ----------------GYEILKGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEGKEVDYTNEKELSLLRNRKLGFVFQ-FHYLIPELTALENVIVPMLKMGKPKKEAKERGEYLLSELGLGDKLSRKPYELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRVMDIFLKINEGGTSIVMVTHERELAELTHRTLEMKD-GKVV----------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PCL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120529 for 1517 contacts (-79.5/contact) +
2D Compatibility (PS) -21049 + (NN) -4378 + (LL) 8428
1D Compatibility (HY) -10800 + (ID) 3900
Total energy: -152228.0 ( -100.35 by residue)
QMean score : 0.566
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