Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKSLLPLGLAIGLASLAASPLIQASTYTQTKYPIVLAHGMLGFDNILG-VDYWFGIPSALRRDGAQVYVTEVSQLDTSE---VRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHKGSDTADFLRQIPPGSAGEAVLSGLVNSLGALISFLSSGSTGTQNSLGSLESLNSEGAARFNAKYPQ---GIPTSACGEGAYKVNG---VSYYSWSGS----------------------SPLTNFLDPSDAFLGASSLTF--KNGTANDGLVGTCSSHLGMVIRDNYRMNHLDEVNQVFGLTSLFETSPVSVYRQHANRLKNASL
1HQD Chain:A ((1-320))-------------------------ADNYAATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQLLAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHRGSEFADFVQGVLAYDPTGLSSTVIAAFVNVFGILTSSSNNTNQDALAALKTLTTAQAATYNQNYPSAGLGAPGSCQTGAPTETVGGNTHLLYSWAGTAIQPTISVFGVTGATDTSTIPLVDPANALDPSTLALFGTGTVMVNRGSGQNDGVVSKCSALYGQVLSTSYKWNHLDEINQLLGVRGANAEDPVAVIRTHANRLKLAGV


General information:
TITO was launched using:
RESULT:

Template: 1HQD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55821 for 2556 contacts (-21.8/contact) +
2D Compatibility (PS) -30486 + (NN) -7343 + (LL) 2028
1D Compatibility (HY) -18000 + (ID) 5750
Total energy: -115372.0 ( -45.14 by residue)
QMean score : 0.382

(partial model without unconserved sides chains):
PDB file : Tito_1HQD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HQD-query.scw
PDB file : Tito_Scwrl_1HQD.pdb: