Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVYAIIGGTGLTQLEGLTLSESLPIETPYGAPSAPLQRGRYAGREVLFLARHGHPHRFPPHQVNYRANLWALKQAGAEAVIAVNAVGGIHAAMGTGHLCVPHQLIDYTSGREHTYFAGDIEHVTHIDFSHPYDEPLRQRLIEALRALGLAHSSHGVYACTQGPRLETVAEIARLERD--GNDIVGMTGMPEAALARELDLPYACLALVVNPAAGKSAGIITMAEIEQALHDGIGKVREVLARVLAG
3T94 Chain:B ((12-243))
-----IIGGSGLYDPGIFSESKEIKVYTPYGQPSDFITIGKIGNKSVAFLPRHGRGHRIPPHKINYRANIWALKELGVRWVISVSAVGSLRMDYKLGDFVIPDQFIDMTKNREYSFFDGPV--VAHVSMADPFCNSLRKLAIETAKELNIKTHESGTYICIEGPRFSTRAE-SRTWREVYKADIIGMTLVPEVNLACEAQMCYATIAMVTDYDVFAEIP-VTAEEVTRVMAENTEKAKKLL------
General information:
TITO was launched using:
RESULT:
Template:
3T94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144419 for 1903 contacts (-75.9/contact) +
2D Compatibility (PS) -25395 + (NN) -15215 + (LL) 1748
1D Compatibility (HY) -18000 + (ID) 4400
Total energy: -205681.0 ( -108.08 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_3T94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T94-query.scw
PDB file :
Tito_Scwrl_3T94.pdb
: