Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLLTELLDELRHPAVRDLAWTLLAPPLLRRTPEPQRHPLAASRWRQEPERLAAWLREQERQPQHLAAWLAQWPRQRLGLYYEHLWQFALEQAPDVRLIAANLPVRDGGHTLGELDLLLRDDDGIHHLELAIKLYLG---PQSGPGDWLGPGGQDRLSRKLEHLCRHQLPLAATREGRQVLAAHGAESAVSALWLSGYLFHPWPGPGSLPADIEPRHLRGRWLRQRDWPAYLA---SLAGPQTGQHWLHLSREHWLAPAMRRQDPLDPPRDGACWNIAFADEARPQMLVRVVPRDGYWVEAERLFLASDDWPPGLSLWGSARQAADA |
2OCC Chain:C ((1-261)) | -------MTHQTHA-----------YHMVNPSPWPLTGALSALLMT---SGLTMWFHFNSM-------TLLMIGLTTNMLTMYQWWRDVIREST-----FQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGGCWPPTGIHPLN-----------PLEVPLLNTSVLLA----SGVSITWAHHSLMEG--DRKHMLQALFITITLGVYFTLLQASEYYEAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHF----TSNHHFGFEAGAWYWHFVDVVWLFLYVS-----IYWWGS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 26331 for 1787 contacts (14.7/contact) +
2D Compatibility (PS) -27712 + (NN) -11605 + (LL) 5604
1D Compatibility (HY) -14400 + (ID) 2000
Total energy: -23782.0 ( -13.31 by residue)
QMean score : 0.148
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