Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVLVIESSARQ-RGSVSRLLTAEFISHWKIAHPADRFQVRDLAREPLPHLDELLLGAWTTPCDGH-----SAAERRALERSNRLTEELRMADVLVLAAPMYNFAIPSSLKSWFDHVLRAGLTFRYAEQGPEGLLQGKRAFVLTARGGIYAGG---GLDHQEPYLRQVLGFVGIHDVTFIHAEGMNMGP----EFREKGLARARERMRQALETDTSLCVPLPTLR
3W78 Chain:C ((2-206))
-TKVLFITANPNSAEGSFGMAVGEAFIEAYKNEHPQDEVVTIDLFNTTVPAIDADVFAAWGKFAAGEGFEALTEVQQQKVAAMNTNLETFMNADRYVFVTPMWNFSYPPVVKAYLDNVAIAGKTFKYTENGPVGLLEGKKALHIQATGGVYSEGAYAAVDFGRNHLKTVLGFVGVNDTEYIAVEGMNANPEKAQEIKEAAIANARE--------------------
General information:
TITO was launched using:
RESULT:
Template:
3W78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102949 for 1422 contacts (-72.4/contact) +
2D Compatibility (PS) -20825 + (NN) -10297 + (LL) 1808
1D Compatibility (HY) -14000 + (ID) 3550
Total energy: -149813.0 ( -105.35 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_3W78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W78-query.scw
PDB file :
Tito_Scwrl_3W78.pdb
: