Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQHRLAAAIALVGLVLSGCDSQTNVELKTPAQKASYGIGLNMGKSLSQEGMDDLDSKAVAKGIEDALGKKKQQLTDEELTEAFAFLQKRAEERMAAIGDENAKAGKKFLEENGKRDGVTTTASGLQYEIVKKADGPQPKATDVVTVHYEGRLTDGTVFDSSIERGSPI--DLPVSGVIPGWVEALQLMHVGEKIKLYIPSELAYGAQSPSPAIPANSVLVFDMELLGIKDPSKPDAEPEAGAAAQPEAKADAKK |
2PBC Chain:D ((7-97)) | -------------------------------------------------------------------------------------------------------------------------------------------RKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKIE------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PBC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56243 for 605 contacts (-93.0/contact) +
2D Compatibility (PS) -9297 + (NN) -1297 + (LL) 9680
1D Compatibility (HY) -8000 + (ID) 2150
Total energy: -67307.0 ( -111.25 by residue)
QMean score : 0.523
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