Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTLLALDTSTEACSVALLHEGRALSHYEVIPRLHAQRLLPMVRDLLDEAGVALSAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALQRPVLAVSDLAILAQRAYREQGAERVAAAIDARMDEVYWGCYQLQQG-EMRLAGSEAVLPPERVAVPWDAAAADWFGAGTGWG-YVERMPQ-RP-VALDASLLPHAEDLLSLAGFAWARGEGVEAEQALPVYLRDNVATPKKAP
3ZEU Chain:A ((2-228))
--RILAIDTATEACSVALWNNGTINAHFELCPREHTQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGLALGANLPMIGVSTLATMAQGAWRKTGATRVLAAIDARMGEVYWAEYQRDAQGVWQGEETEAVLKPERVGERLKQLSGEWATVGTGWSAWPDLAKECGLTLHDGEVSLPAAEDMLPIASQKLAAGETVAVEHAEPVYLRNEVAWKKLP-
General information:
TITO was launched using:
RESULT:
Template:
3ZEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171630 for 1949 contacts (-88.1/contact) +
2D Compatibility (PS) -23184 + (NN) -3236 + (LL) 40
1D Compatibility (HY) -16800 + (ID) 5400
Total energy: -220210.0 ( -112.99 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_3ZEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZEU-query.scw
PDB file :
Tito_Scwrl_3ZEU.pdb
: