Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLLVLFCCLWLLPGVASAAPSVGEIRVVS-ETWTRYTQED----GRGVAWDLLRAVYEPA-------GVRLRIANEPYTRAVGLVLRGEADAWVG-AYRGEIDE--ALYPRWPYDVDPIAVLSLKDNPPPPLEGLSRFRLSWMRGYAFARYFPT-------LTPHSELQRRTSALPMLLNHRVDYFIDSRPELEEMLAGAGALAAEYRI--TDVTRLPLYLGFSDSPRGRELLALFDRRMRQLHASGELERIFARWNWPYAPLKAILPPKE |
| 2VHA Chain:A ((12-252)) | ------------------KIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAFSD-TIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAK-KPDNWDIVGKPQSQEAYGCMLRKD--DPQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPIP--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VHA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106082 for 1756 contacts (-60.4/contact) +
2D Compatibility (PS) -23973 + (NN) -13239 + (LL) 2864
1D Compatibility (HY) -4000 + (ID) 1800
Total energy: -146230.0 ( -83.27 by residue)
QMean score : 0.356
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