Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFSWSEILLELLAVAVLFFGVHWSLRHAKTLDQASMLPFADDEEVARRVERETGRSRTGCGCPGRCQGDCRHWDKNWPA
1Q0W Chain:A ((1-24))
-------------------------------------YPEDEEELIRKAIELSLKESRNSA-------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q0W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3660 for 88 contacts (41.6/contact) +
2D Compatibility (PS) -2714 + (NN) -1367 + (LL) 4112
1D Compatibility (HY) -400 + (ID) 250
Total energy: 3041.0 ( 34.56 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_1Q0W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q0W-query.scw
PDB file :
Tito_Scwrl_1Q0W.pdb
: