Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHATSSDDFSLSSRVALVTGAGRGIGRGIALALARAGADVAVADLDPQVAEETAAAIRSLGRRSLALGVDVSDGDSVRAMVERVATEFGRLDVAVNNAGVISIRKVAELSLADWDRVMNVNARGVFLCCQ-AELPLMQAQRWGRIVNLSSIAGKVGLPDLAHYCASKFAVIGFSNALAKEVARDGVTVNALCPGIVGTGM------WRGEDGLSGRWRQAGESEAQSWERHQASLLPQGEAQTVEDMGQLVVYLA--CAPHVTGQAIAVDGGFSL |
| 3AK4 Chain:D ((8-262)) | --------FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG---FAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAE--LRGMTPEAVRAE-------YVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVRM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163995 for 2147 contacts (-76.4/contact) +
2D Compatibility (PS) -26236 + (NN) -6780 + (LL) 804
1D Compatibility (HY) -17600 + (ID) 5550
Total energy: -219357.0 ( -102.17 by residue)
QMean score : 0.492
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