Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNSNLAAARNLIQVVTGEWKSRCVYVATRLGLADLIES--GIDSDETLAAAVGSDAE---RIHRLMRLLVAFEIFQGD--TRDGYANTPTSHLLR-DVEGSFRDMVLFYGE-EFHAAWTPACEALLSGTP-GFELAFGEDFYSYLKRCPDAGRRFLLAMKASNLAFHEIPRL--LDFR-GRSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGD---GRVVVIERTISASE-PSP---MSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDLPMETRMIVAARA |
| 1FP2 Chain:A ((15-352)) | ------KAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFEIITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSG-------SNNLTYVGGDMFTSIP-NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMA-CLNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176289 for 2400 contacts (-73.5/contact) +
2D Compatibility (PS) -34414 + (NN) -17850 + (LL) 976
1D Compatibility (HY) -25200 + (ID) 3950
Total energy: -256727.0 ( -106.97 by residue)
QMean score : 0.452
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