Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLCLDSLLNGTQDPKAFGRVAVLFGGKSAEREVSLKSGAMVLQSL-------LAAGVDAFG----IDVGEDLLQ---------------------------RLVEE-KIDRAFIILHGRGGEDGSMQGLLECAGIPYTGSGVLASALAMDKLRTKRVWLSLGLPTPDYAVL----ASEDDCREAAQRLGFPLIVKPAHEGSSIGMAKVGGLDELIAAWREAARYDSQVLVEQWISGPEFTVATLRGQVLPAIRLG---TPHTFYDYDAKYLASDTRYQVPCGLDEAKERELKELTARACDALGIQGWGRADVMQDAEGRFWLLEVNTAPGMTDHSLVPMAARAAGLDFQQLVLAILADSREARG |
| 4ME6 Chain:A ((24-366)) | -------------------RVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDKQGQWHVNDPDSFLLHADDPARIALHRSGRGVALLPGAQQQQLRPIQ-AQIDVVFPIVHGTLGEDGSLQGLLRMANLPFVGSGVLGSAVAMDKDMAKRVLRDARLAVAPFVCFDRHT-AHADVDTLIAQLGLPLFVKPANQ---VGVSQVRTADAFAAALALALAYDHKVLVEAAVAGREIECAVLGNAVPHASVCGEVV-----------------EIVIPADIDAQTQQRIQQIAVQAYQALGCAGMARVDVFLCADGRIVINEVNTLPGFTRISVYPKLWQASGLDYRGLITRLI-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ME6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152614 for 2185 contacts (-69.8/contact) +
2D Compatibility (PS) -29891 + (NN) -15225 + (LL) 1732
1D Compatibility (HY) -24400 + (ID) 5500
Total energy: -225898.0 ( -103.39 by residue)
QMean score : 0.510
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