Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGL--R-G-KGL----KSLVKAPLE-LLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAVA--GTA---NRSLAPI-------------------------A------RRVCEAFPDTFPA-----SDKRLTTGNPVRGELFLDAHARAPLTGRRVNLLV-LGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQHA-EITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVARG |
| 2IYA Chain:A ((11-421)) | TPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDE--FAAQVKAAGATPVVYDSILPKESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASW--PAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGDTVGDNYTFVGPTYGDRSHQG-TWE-GPGDGRPVLLIALGSA-FTDHL-DFYRTCLSAVDG-LDWHVVLSVGRFVDPADLG----EVPPNVEVHQWVPQL-DILTKASAFITHAGMGSTMEALSNAVPMVAVPQ----IAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPGVAERLAAVRQEIREAGGARAAADILEGILA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195966 for 2865 contacts (-68.4/contact) +
2D Compatibility (PS) -36792 + (NN) -18324 + (LL) 1020
1D Compatibility (HY) -6400 + (ID) 3600
Total energy: -260062.0 ( -90.77 by residue)
QMean score : 0.414
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