Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLHAAAVGPSVLPDLREQ---VEQIIAEARRQGASACEVAVSLEQGLSTSVRQGEVETVEFNRDQGFGITLYAGQRKGSASTSATGEAAIRETVAAALAIARHTSEDEC---AGLADAALMARELPELDLYHPWSLSPEQAVERALACEAAAFAADKRVTKADGTTLNTHQGCRVYG---NSHGFIGGYASTRHSLSCVMIAEGEGQMQRDYWYDVNRRGEALASAESIGRRAAERAASRLGARPVQTAEVPVLFAPEIAVGLFGHFLGAISGGSLYRKSSFLEGALGQRLFPEWLSIDERPHLVGALGSAS--FDSDGLATYAKPFVE-------------------NGELVSYVLGTYSGRKLGLPSTANAGGVHNLFV----------------SHGDEDQAALIRRMERGLLVTELMGQGVNLVTGDYSRGAAGYWVENGEIQFPVQEVTIAANLRDLFRRIVAVGKDIERRGNLHTGSVLVESMMVAGR |
| 4OV8 Chain:A ((6-472)) | DTLNDVIQDPTRRNKLINDNNLLKGIIMGRDGPVPSSRELIVRPDTLRAIINNRATIETTTMEAE--FTETLME---------SNYNSASVKVSAPCITANSEYSESSSFKNTETEKSMYTSSRYLFPQGRIDFTTPDSGDVIKLSPQFTSGVQAALAKATGTEKRE-ALQNLFQEYGCVFRTKVHIGGVLSA-HTMETFSRSENETEVKQDVKAGLEGAVKGWGGGATAGH-GNTQGTITTSQNRKLNVKYIVNGGDYTKIQNTEEWVASTNQSEHWRVIEVTEVTAVADLLPQPIRGQVKDLLKPLLGKWVDVEKVPGLESLPVSVYRPKGAIPAGWFWLGDTADASKALLVKPTLPARSGRNPALTSLHQGSGMTEQPFVDLPQYQYLSTYFGSFAHDTPPGSTL-----RGLRPDH-VLPGRYEMHGD-TISTAVYVTRPVDVPFPEDE---AFDLKSLVRVKLPGSGNPPK-----PRSALKKSMVLFD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80236 for 3106 contacts (-25.8/contact) +
2D Compatibility (PS) -42702 + (NN) 8856 + (LL) 2004
1D Compatibility (HY) -1200 + (ID) 3600
Total energy: -116878.0 ( -37.63 by residue)
QMean score : 0.108
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