Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFGSFSWRSPMTGTKPTTPVARYFHQEAQRRGYVLDAAQGNAILHLDRLAERLRRGPSLFRQAPRSLYLWGPVGRGKSWLMDGFFRS---------ADLQGLRRTHFHAFFRRLHDGM-FRRQGRPDALGGALDELLGDCR------LLCFDEFHVHDIGDAMLITRL---FRELFGRKITLVCTSNYAPRQLLPNPLYHERFLP------------AIRLIETRMEVLEVAGARDYRTISPRQEIASGY----ASGGYCWPASCACLDELGLSAPEPSQRVTLQSGARTLQARAVCGDLVWFAFADLCEAPTAVMDYLALGERFS-------TWVLEGVPPMARCSVAAQQRFINLVDVLYDNDRRFFLSAEKALPDLVEGSDLPADMQRTASRLAQLRQLRC |
| 1FNN Chain:A ((2-389)) | ---AIVVDDSVFSPSYVPKRLP-------------------HREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEVL--FGISEEVLIGLPLHEKLFLLAIVRSLKISHTPYITFGDAEESYKIVCEEYGERPRVHSQLWSYLNDLREKGIVETRQNTTLISIGTEPLDTLEAVITKLIKEELR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126467 for 2607 contacts (-48.5/contact) +
2D Compatibility (PS) -35316 + (NN) -5695 + (LL) 2220
1D Compatibility (HY) -2000 + (ID) 1900
Total energy: -169158.0 ( -64.89 by residue)
QMean score : 0.262
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