Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQPQAFYRVVAEDFTAVDGIIRRQLTSRVPLVEKIGDYIISAGGKRLRPLLVLLAGKTLGYKGDDLCLL--AATIEFLHTSTLLHDDV--VDASGLRRGRSTANALWGNAPSVLVGDFLYARSFEMMVEL--GSMP--VMRIISQ-ATRVIAEGEVL-QLSKVRDASTTEE--TYMEVIRG-KTAMLFEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAATLGKNVGDDLAEGKPTLPLIVTMRDGTEEQAALVRKAIQQGGSQDLESVCAAVEAAGALDYTANLARDYAARAIACLDTLPDNEYRSALVELSEFAVARTH |
3OAC Chain:D ((37-271)) | -------------------------------------YSLLAGGKRVRPMLCIAACELVG--GDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKTTYPKLIGVEKSKEFADRLNREAQEQ------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OAC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -48149 for 1720 contacts (-28.0/contact) +
2D Compatibility (PS) -24069 + (NN) -11973 + (LL) 8004
1D Compatibility (HY) -14000 + (ID) 4050
Total energy: -94237.0 ( -54.79 by residue)
QMean score : 0.302
|
|
|