Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMRGWILAGLLLAALAAQAGEVHGVEVEARLRDYFFDAARRGDQAMLKEFVEAGFDLDVQDAKGYTALILAAYHGHGGAVEQLLEAGADPCVQDARGNTALMGAIFKGEVRIARRLIGAQCSPDQRNGAGQTAAMYAALFKREELLQALSARGADLGARDALGNSVESLRRGELNGTAAAR
3Q9U Chain:C ((10-138))
------------------------------------LLEAAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALG------------------
General information:
TITO was launched using:
RESULT:
Template:
3Q9U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59298 for 1058 contacts (-56.0/contact) +
2D Compatibility (PS) -14761 + (NN) -13925 + (LL) 4600
1D Compatibility (HY) -5200 + (ID) 2200
Total energy: -90784.0 ( -85.81 by residue)
QMean score : 0.695
(partial model without unconserved sides chains):
PDB file :
Tito_3Q9U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q9U-query.scw
PDB file :
Tito_Scwrl_3Q9U.pdb
: