Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEQPLSRPGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERAL--RGLDGVIFSAGYYPSRP---RRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDS-LPSGKSSYVLCKWALDEQAREQA-RNGLPVVIGIPGMVLGELDIGP----T-TGRVITAIGN-----G-EMTHYVAG--QRNVIDAAEAGRGLLMALERG---------RIGERYLLTG-HNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDNGYFNA |
| 1E6U Chain:A ((2-316)) | ----------AKQRVFIAGHRGMVGSAIRRQLEQRGDVELV-LRTRDE-------------LNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAK-QPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDA-----------------S-KPD--------GTPRKLLDVTRLH-QLGWYHEISLEAGLASTYQWFLENQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157916 for 2307 contacts (-68.5/contact) +
2D Compatibility (PS) -31553 + (NN) -15480 + (LL) 4872
1D Compatibility (HY) -15600 + (ID) 2300
Total energy: -217977.0 ( -94.49 by residue)
QMean score : 0.407
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