Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQQIQRDIAQALQVQPPFQSEADVQAQIARRIAFIQQCLKDSGLKTLVLGISGGVDSLTAGLLAQRAVEQLREQTGDQAYRFIAVRLPYQVQQDEADAQASLATIRADEEQTVNIGPSVKALAEQLEALEGLEPAKSDFVIGNIKARIRMVAQYAIAGARGGLVIGTDHAAEAVMGFFTKFGDGACDLAPLSGLAKHQVRALARALGAPENLVEKIPTADLEDLRPGHPDEASHGVTYAEIDAFLHGQPLREEAARVIVDTYHKTQHKRELPKAP |
4Q16 Chain:D ((8-274)) | LSPLRSHIIRELHVQP----DIDPGAEVERRVAFLCDYLQSTPTKGFVLGISGGQDSTLAGRLCQLAVERRRSQ--GHGATFLAVRLPYGVQADEADAQQALDFIQADREVTVNIKEAADASVAAAQAALGSE--VRDFVRGNVKARERMVAQYALAGQENLLVVGTDHAAEALTGFYTKYGDGGVDLTPLSGLTKRQGAQLLAHLGAPEGTWRKVPTAD----RPGLPDEVALGVTYAQIDAYLEGREVSDEAAARLERLFLNSRHKRALPVTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112663 for 2137 contacts (-52.7/contact) +
2D Compatibility (PS) -29348 + (NN) -22791 + (LL) 348
1D Compatibility (HY) -15600 + (ID) 6900
Total energy: -186954.0 ( -87.48 by residue)
QMean score : 0.615
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