Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPLVATVDLSAIRHNYALAKRCAPQ-RQAFAVVKANAYGHGAREVV-TALHDDADGFAVACLEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGA---EQGEAFLAAGLDIPLNVWLKLDSGMHRLGF-DPAALRAWHARLRSHPGVRELNLISHFACADERNHPLTEQQLESFLGLLDLDFDQRSL---ANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLSAA-ELGLKPAMSLGAQLISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPRTAPAGTPVLVGGRRAILAGRVSMDMLAVDL-SDLPEARVGDPVELWGAG----LSVDEVARACGTLGYELLSKVTARVPRRYSH |
| 1FTX Chain:B ((9-367)) | -----AEVDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPILVL-GASRPADAALAAQQRIALTVFRSDWLEEASALYSGPFPIHFHLKCXMDTGMGRLGVKDEEETKRIVALIERHPHFVLEGLYTHFATADEVNTDYFSYQYTRFLHMLEWLPSRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEAFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRL-QHFHVLVDGQKAPIVGRICMDQCMIRLPGPLP---VGTKVTLIGRQGDEVISIDDVARHLETINYEVPCTISYRVPRIF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FTX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110255 for 2764 contacts (-39.9/contact) +
2D Compatibility (PS) -35175 + (NN) -287 + (LL) 1048
1D Compatibility (HY) -800 + (ID) 3150
Total energy: -148619.0 ( -53.77 by residue)
QMean score : 0.127
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