Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPQPLADNLSPPDPARLAQSIKDWGRELGFQQVGISDVELGEHEAHLQRWLEAGYHGEMDYMAAHGSKRSRPAELVPGTLRVISLRMDYLPGDTRMAQVLATPEKAYVSRYALGRDYHKLIRKRLQQLAERIQAEVGPFGFRAFVDSAPVLEKAIAEQAGLGWIGKNTLVLNRKAGSYFFLGELFVDMPLPVDPAMDSEHCGRCSACLDICPTAAFVGP---YRLDARRCISYLTIEYKGAIPLELRPLIGNRVFGCD------DCQIVCPWNRFARPTGQGDFQPRHSLDNAELAELFLWSEEEFLGRTEGSPLRRAGYERWLRNLAVGLGNAPSTIPVLEALKARRGFPSELVREHVEWALRRHGET |
| 2FGO Chain:A ((4-59)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITDDCINCDVCEPECPNGAISQGEEIYVIDPNLCT------------------------ECVGHYDEPQCQQVCPVDCIP--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FGO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34978 for 286 contacts (-122.3/contact) +
2D Compatibility (PS) -4877 + (NN) -1941 + (LL) 20560
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -25586.0 ( -89.46 by residue)
QMean score : 0.318
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