Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRMALKPLVAACLLASLSTAPQAAPSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDRARQGLGADPNA--LYYITGGGNDFLQGRILNDVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATFGG-----PLQPFASQLSGTFNAELTAQLSQAGANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGNGCTMNPTYGINGSTPDPSKLLFNDSVHPTITGQRLIADYTYSLLSAPWELTLLPEMAHGTLRAYQDELRSQWQADWENWQNVGQWRGFVGGGGQRLDFDSQDSAASGDGNGYNLTLGGSYRIDEAWRAGVAAGFYRQKLEAGAKDSDYRMNSYMASAFVQYQENRWWADAALTGGYLDYDDLKRKFALGGGERSEKGDTNGHLWAFSARLGYDIAQQADSPWHLSPFVSADYARVEVDGYSEKGASATALDYDDQKRSSKRLGAGLQGKYAFGSDTQLFAEYAHEREYEDDTQDLTMSLNSLPGNRFTLEGYTPQDHLNRVSLGFSQKLAPELSLRGGYNWRKGEDDTQQSVSLALSLDF |
| 3MIL Chain:A ((2-210)) | ---------------------------DYEKFLLFGDSITEFAFNTRPIE--------DG------------KDQYALGAALVNEYTRK-----------------MDILQRGFKGYTSRWAL------------------KILPEILKH---------ESNIVMATIFLGANDACSAGPQ-SVPLPEFIDNIRQMVSLMKSYHI-RPIIIGPGLVDREKWEKEKSEEIALGYFRTNENFAIYSDALAKLANE--EKVPFVALNKAFQQEG------------------------------------GDAWQQLLTDGLHFSGKGYKIFHDELLKVIETF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MIL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97674 for 1653 contacts (-59.1/contact) +
2D Compatibility (PS) -22194 + (NN) -12911 + (LL) 20132
1D Compatibility (HY) -2400 + (ID) 1300
Total energy: -116347.0 ( -70.39 by residue)
QMean score : 0.400
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